module m_ncvar_read integer, parameter, private :: lprt=6 contains subroutine ncvar_read(filename,varname,field,nx,ny,nrec,rec1,rec2,forcerec) use netcdf use mod_xc , only : xcstop,mnproc implicit none character(len=*), intent(in) :: varname,filename integer, intent(in) :: nx,ny,nrec integer, intent(in) :: rec1,rec2 real, dimension(nx,ny,nrec), intent(inout) :: field integer, optional, intent(in) :: forcerec integer :: i integer :: ncid,rdim,ngatts,varid,ndims,natts integer :: recdim,lvec integer :: dimids(NF90_MAX_VAR_DIMS) integer :: dimsizes(NF90_MAX_VAR_DIMS) integer :: alloc_size(NF90_MAX_VAR_DIMS) integer :: startvec(NF90_MAX_VAR_DIMS) integer :: mapvec (NF90_MAX_VAR_DIMS) real :: add_offset, scale_factor real, allocatable :: tmp1(:), tmp2(:,:),tmp3(:,:,:) logical :: quiet quiet=.true. !print *,'ncvar_read entry' ! Error checks if (rec2-rec1> nrec ) then if (mnproc==1) then write(lprt,'(a)') 'Attempted to extract more records than'// & 'place for in temporari field "field" ' write(lprt,'(a)') 'Filename is : '//filename write(lprt,'(a)') 'Variable name is is: '//varname end if call xcstop('(ncvar_read)') stop '(ncvar_read)' else if (rec2<0.or.rec1<0) then if (mnproc==1) write(lprt,'(a)') 'Incorrect record indices rec1 rec2 ...' call xcstop('(ncvar_read)') stop '(ncvar_read)' else if (rec2-rec1+13 (Max dimension of "field" if (ndims>3) then if (mnproc==1) & write(lprt,'(a)') 'Sorry -- this routine can only '// & 'handle 3 dimensonal Netcdf Vars' call xcstop('(ncvar_read)') stop '(ncvar_read)' end if ! Display variable atts -- return scale_factor and add_offset if ! necessary !print *,'ncvar_dump_att 2 entry' call dump_atts(ncid,varid,natts,scale_factor,add_offset,quiet) !print *,'ncvar_dump_att 2 exit' ! Inquire on variable dimensions -- sizes dimsizes=0 alloc_size=0 recdim=0 lvec=1 do i=1,ndims call nf90_handle_err( & nf90_Inquire_Dimension(ncid, dimids(i), len=dimsizes(i)), & ' Error on inquiring dimension for var '//varname) if (dimids(i)==rdim .or. (present(forcerec) .and. i==forcerec)) then !recdim=rdim recdim=i lvec=lvec*nrec alloc_size(i)=nrec !print *,i,alloc_size(i),lvec,nrec else lvec=lvec*dimsizes(i) alloc_size(i)=dimsizes(i) !print *,i,alloc_size(i),lvec end if end do ! Check that field dimensions are consistent if (lvec /= nx*ny*nrec ) then if (mnproc==1) then write(lprt,'(a)') 'field dims are inconsistent' print *,'nx ny nrec ',nx,ny,nrec print *,'nx*ny*nrec ',nx*ny*nrec,lvec end if call xcstop('(ncvar_read)') stop '(ncvar_read)' else if (recdim>0) then !print *,'record dim : ',dimsizes(recdim) if (rec1>dimsizes(recdim) .or. rec2>dimsizes(recdim)) then if (mnproc==1) write(lprt,'(a)') 'rec1 or rec2 exceed record dimension' call xcstop('(ncvar_read)') stop '(ncvar_read)' end if else if (recdim==0) then if (rec1/=1 .or. nrec>1 ) then if (mnproc==1) write(lprt,'(a)') 'Variable '//varname//' does not contain'//& 'a record id but nrec > 1' call xcstop('(ncvar_read)') stop '(ncvar_read)' end if end if ! Set "start" vector do i=1,ndims if (dimids(i)==rdim .or. (present(forcerec) .and. i==forcerec)) then startvec(i)=rec1 else startvec(i)=1 end if end do ! Finally read field !print *,startvec(1:ndims) !print *,dimsizes(1:ndims) !print *,alloc_size(1:ndims) !print *,nx,ny,nrec,rec1,rec2,lvec if (ndims==1) then allocate(tmp1(alloc_size(1))) call nf90_handle_err( & NF90_GET_VAR(ncid,varid,tmp1,& start=startvec(1:ndims)), & 'Error in retrieving '//varname//' values') field = reshape(tmp1,(/nx,ny,nrec/)) !print *,field ! print *,scale_factor,add_offset,maxval(field),minval(field) field = field * scale_factor + add_offset deallocate(tmp1) else if (ndims==2) then allocate(tmp2(alloc_size(1),alloc_size(2))) call nf90_handle_err( & NF90_GET_VAR(ncid,varid,tmp2,& start=startvec(1:ndims)), & 'Error in retrieving '//varname//' values') field = reshape(tmp2,(/nx,ny,nrec/)) !print *,scale_factor,add_offset,maxval(field),minval(field) field = field * scale_factor + add_offset deallocate(tmp2) else if (ndims==3) then allocate(tmp3(alloc_size(1),alloc_size(2),alloc_size(3))) call nf90_handle_err( & NF90_GET_VAR(ncid,varid,tmp3,& start=startvec(1:ndims)), & 'Error in retrieving '//varname//' values') field = reshape(tmp3,(/nx,ny,nrec/)) !print *,scale_factor,add_offset,maxval(field),minval(field) field = field * scale_factor + add_offset deallocate(tmp3) end if ! Close NetCDF file call nf90_handle_err(& NF90_CLOSE(ncid),& 'Error on closing '//filename) !print *,'ncvar_read exit' end subroutine ncvar_read subroutine dump_atts(ncid,varid,natts,scale_factor,add_offset,quiet) use netcdf implicit none integer,intent(in) :: ncid,varid,natts real,intent(out),optional :: scale_factor,add_offset logical, intent(in), optional :: quiet logical :: silent integer :: i integer :: nctype,attlen character(len=80) :: attname character(len=3) :: cll character(len=200) :: attval_char real :: attval_real(200) silent = .true. if (present(quiet)) silent = quiet if(present(scale_factor)) scale_factor=1. if(present(add_offset)) add_offset=0. if (.not.silent) write(lprt,'(a)') 'Global NetCDF file info ' do i=1,natts call nf90_handle_err(& NF90_INQ_ATTNAME(ncid,varid,i,attname), & 'Error on inquiring attribute name') !print *,'attname = '//trim(attname) ! Skip history attribute (can be really long and causes (recoverable) error messages) if (trim(attname)=='history') cycle call nf90_handle_err(& NF90_INQUIRE_ATTRIBUTE(ncid,varid,attname,xtype=NCtype,len=attlen), & 'Error on inquiring attribute '//attname) !print *,i,natts,ncid,varid,trim(attname),attlen,NCtype if (attlen<200) then if (NCtype==NF90_CHAR) then call nf90_handle_err(& NF90_GET_ATT(ncid,varid,trim(attname),attval_char(1:attlen)),& 'Error obt att') if(.not.silent)& write(lprt,'(a)') trim(attname)//':'//trim(attval_char(1:attlen)) else if (NCtype==NF90_SHORT.or.NCtype==NF90_INT.or. & NCtype==NF90_FLOAT.or.NCtype==NF90_DOUBLE ) then !print *,NCtype,attlen !print *,'int=',NF90_INT ,' short=', NF90_SHORT ,' float=', NF90_FLOAT & !,' double=', NF90_DOUBLE call nf90_handle_err(& NF90_GET_ATT(ncid,varid,trim(attname),attval_real(1:attlen)),& 'Error obt att') write(cll,'(i3.3)')attlen if(.not.silent)& write(lprt,'(a,'//cll//'g14.7)') trim(attname)//':',attval_real(1:attlen) else if(.not.silent)& write(lprt,'(a,i4,a)') 'Variable type ',NCtype,' is unknown' end if if (attname=='scale_factor') then if (present(scale_factor)) & call nf90_handle_err(& NF90_GET_ATT(ncid,varid,attname,scale_factor), & 'Error obt att') else if (attname=='add_offset') then if (present(add_offset)) & call nf90_handle_err(& NF90_GET_ATT(ncid,varid,attname,add_offset),& 'Error obt att') end if else !print *,attlen if(.not.silent)& print *, 'Length of attribute '//trim(attname)//' > 200, I will not display it ...' end if end do end subroutine subroutine nf90_handle_err(errcode,info) use mod_xc , only: xcstop, mnproc use netcdf implicit none integer, intent(in) :: errcode character(len=*), intent(in) :: info if (errcode/=NF90_NOERR) then if (mnproc==1) then write(lprt,'(a)') NF90_STRERROR(errcode) write(lprt,'(a)') info end if stop '(ncvar_read)' call xcstop('(ncvar_read)') end if end subroutine end module m_ncvar_read